start niftisave
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John Cupitt
parent
b0168a3cf6
commit
76eef8912e
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@ -109,13 +109,18 @@ typedef struct _DT2Vips {
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} DT2Vips;
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static DT2Vips vips_DT2Vips[] = {
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{ DT_UNSIGNED_CHAR, VIPS_FORMAT_UCHAR },
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{ DT_SIGNED_SHORT, VIPS_FORMAT_SHORT },
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{ DT_SIGNED_INT, VIPS_FORMAT_INT },
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{ DT_FLOAT, VIPS_FORMAT_FLOAT },
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{ DT_COMPLEX, VIPS_FORMAT_COMPLEX },
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{ DT_DOUBLE, VIPS_FORMAT_DOUBLE },
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{ DT_RGB, VIPS_FORMAT_UCHAR }
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{ DT_UINT8, VIPS_FORMAT_UCHAR },
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{ DT_INT8, VIPS_FORMAT_CHAR },
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{ DT_UINT16, VIPS_FORMAT_USHORT },
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{ DT_INT16, VIPS_FORMAT_SHORT },
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{ DT_UINT32, VIPS_FORMAT_UINT },
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{ DT_INT32, VIPS_FORMAT_INT },
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{ DT_FLOAT32, VIPS_FORMAT_FLOAT },
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{ DT_FLOAT64, VIPS_FORMAT_DOUBLE },
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{ DT_COMPLEX64, VIPS_FORMAT_COMPLEX },
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{ DT_COMPLEX128, VIPS_FORMAT_DPCOMPLEX },
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{ DT_RGB, VIPS_FORMAT_UCHAR },
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{ DT_RGBA32, VIPS_FORMAT_UCHAR }
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};
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/* Slow and horrid version if there's no recent glib.
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@ -0,0 +1,159 @@
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/* save to nifti
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*
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* 5/7/18
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* - from fitssave.c
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*/
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/*
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This file is part of VIPS.
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VIPS is free software; you can redistribute it and/or modify
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it under the terms of the GNU Lesser General Public License as published by
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the Free Software Foundation; either version 2 of the License, or
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(at your option) any later version.
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This program is distributed in the hope that it will be useful,
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but WITHOUT ANY WARRANTY; without even the implied warranty of
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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GNU Lesser General Public License for more details.
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You should have received a copy of the GNU Lesser General Public License
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along with this program; if not, write to the Free Software
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Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA
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02110-1301 USA
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*/
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/*
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These files are distributed with VIPS - http://www.vips.ecs.soton.ac.uk
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*/
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/*
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#define DEBUG_VERBOSE
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#define DEBUG
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*/
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#ifdef HAVE_CONFIG_H
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#include <config.h>
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#endif /*HAVE_CONFIG_H*/
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#include <vips/intl.h>
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#include <stdio.h>
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#include <stdlib.h>
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#include <string.h>
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#include <vips/vips.h>
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#ifdef HAVE_CFITSIO
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#include "pforeign.h"
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typedef struct _VipsForeignSaveNifti {
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VipsForeignSave parent_object;
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/* Filename for save.
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*/
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char *filename;
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} VipsForeignSaveNifti;
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typedef VipsForeignSaveClass VipsForeignSaveNiftiClass;
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G_DEFINE_TYPE( VipsForeignSaveNifti, vips_foreign_save_nifti,
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VIPS_TYPE_FOREIGN_SAVE );
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static int
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vips_foreign_save_nifti_build( VipsObject *object )
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{
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VipsForeignSave *save = (VipsForeignSave *) object;
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VipsForeignSaveNifti *nifti = (VipsForeignSaveNifti *) object;
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VipsImage **t = (VipsImage **)
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vips_object_local_array( VIPS_OBJECT( nifti ), 2 );
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if( VIPS_OBJECT_CLASS( vips_foreign_save_nifti_parent_class )->
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build( object ) )
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return( -1 );
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return( 0 );
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}
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/* Save a bit of typing.
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*/
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#define UC VIPS_FORMAT_UCHAR
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#define C VIPS_FORMAT_CHAR
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#define US VIPS_FORMAT_USHORT
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#define S VIPS_FORMAT_SHORT
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#define UI VIPS_FORMAT_UINT
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#define I VIPS_FORMAT_INT
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#define F VIPS_FORMAT_FLOAT
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#define X VIPS_FORMAT_COMPLEX
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#define D VIPS_FORMAT_DOUBLE
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#define DX VIPS_FORMAT_DPCOMPLEX
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static int vips_nifti_bandfmt[10] = {
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/* UC C US S UI I F X D DX */
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UC, C, US, S, UI, I, F, X, D, DX
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};
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static void
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vips_foreign_save_nifti_class_init( VipsForeignSaveNiftiClass *class )
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{
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GObjectClass *gobject_class = G_OBJECT_CLASS( class );
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VipsObjectClass *object_class = (VipsObjectClass *) class;
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VipsForeignClass *foreign_class = (VipsForeignClass *) class;
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VipsForeignSaveClass *save_class = (VipsForeignSaveClass *) class;
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gobject_class->set_property = vips_object_set_property;
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gobject_class->get_property = vips_object_get_property;
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object_class->nickname = "niftisave";
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object_class->description = _( "save image to nifti file" );
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object_class->build = vips_foreign_save_nifti_build;
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foreign_class->suffs = vips__nifti_suffs;
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save_class->saveable = VIPS_SAVEABLE_ANY;
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save_class->format_table = vips_nifti_bandfmt;
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VIPS_ARG_STRING( class, "filename", 1,
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_( "Filename" ),
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_( "Filename to save to" ),
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VIPS_ARGUMENT_REQUIRED_INPUT,
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G_STRUCT_OFFSET( VipsForeignSaveNifti, filename ),
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NULL );
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}
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static void
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vips_foreign_save_nifti_init( VipsForeignSaveNifti *nifti )
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{
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}
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#endif /*HAVE_CFITSIO*/
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/**
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* vips_niftisave: (method)
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* @in: image to save
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* @filename: file to write to
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* @...: %NULL-terminated list of optional named arguments
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*
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* Write a VIPS image to a file in NIFTI format.
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*
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* See also: vips_image_write_to_file().
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*
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* Returns: 0 on success, -1 on error.
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*/
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int
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vips_niftisave( VipsImage *in, const char *filename, ... )
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{
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va_list ap;
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int result;
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va_start( ap, filename );
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result = vips_call_split( "niftisave", ap, in, filename );
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va_end( ap );
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return( result );
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}
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