From ab1d4ac6b8e251841b37fb13bbdac1badf501031 Mon Sep 17 00:00:00 2001 From: John Cupitt Date: Thu, 11 Oct 2012 12:47:17 +0100 Subject: [PATCH] look for tile-width and tile-height properties get tile geo from openslide --- ChangeLog | 1 + libvips/foreign/openslide2vips.c | 57 ++++++++++++++++++++++---------- 2 files changed, 40 insertions(+), 18 deletions(-) diff --git a/ChangeLog b/ChangeLog index 000d5217..e2e5231a 100644 --- a/ChangeLog +++ b/ChangeLog @@ -2,6 +2,7 @@ - dzsave can write zoomify and google maps layout as well - openslide2vips now opens the input once for each thread - tilecache supports threaded access +- openslide2vips gets underlying tile size from openslide 2/10/12 started 7.30.4 - remove options from format string in .dzi (thanks Martin) diff --git a/libvips/foreign/openslide2vips.c b/libvips/foreign/openslide2vips.c index 209b9715..1997059c 100644 --- a/libvips/foreign/openslide2vips.c +++ b/libvips/foreign/openslide2vips.c @@ -37,6 +37,8 @@ * 4/10/12 * - open the image once for each thread, so we get some parallelism on * decode + * 11/10/12 + * - look for tile-width and tile-height properties */ /* @@ -82,15 +84,6 @@ #include "openslide2vips.h" -/* We run our own tile cache. The OpenSlide one can't always keep enough for a - * complete lines of pixels. - * - * These numbers need to align with the tiles used in the underlying openslide - * image. We need to add something to openslide to output this data. - */ -#define TILE_WIDTH (256) -#define TILE_HEIGHT (256) - typedef struct { openslide_t *osr; char *filename; @@ -102,6 +95,11 @@ typedef struct { int32_t level; double downsample; uint32_t bg; + + /* Try to get these from openslide properties. + */ + int tile_width; + int tile_height; } ReadSlide; int @@ -183,6 +181,11 @@ readslide_new( const char *filename, VipsImage *out, rslide->level = level; rslide->associated = g_strdup( associated ); + /* Non-crazy defaults, override below if we can. + */ + rslide->tile_width = 256; + rslide->tile_height = 256; + rslide->osr = openslide_open( rslide->filename ); if( rslide->osr == NULL ) { vips_error( "openslide2vips", @@ -216,12 +219,29 @@ readslide_new( const char *filename, VipsImage *out, vips_demand_hint( out, VIPS_DEMAND_STYLE_THINSTRIP, NULL ); } else { + char buf[256]; + const char *value; + openslide_get_level_dimensions( rslide->osr, level, &w, &h ); rslide->downsample = openslide_get_level_downsample( rslide->osr, level ); vips_image_set_int( out, "slide-level", level ); vips_demand_hint( out, VIPS_DEMAND_STYLE_SMALLTILE, NULL ); + + /* Try to get tile width/height. An undocumented, experimental + * feature. + */ + vips_snprintf( buf, 256, + "openslide.level[%d].tile-width", level ); + if( (value = openslide_get_property_value( rslide->osr, buf )) ) + rslide->tile_width = atoi( value ); + vips_snprintf( buf, 256, + "openslide.level[%d].tile-height", level ); + if( (value = openslide_get_property_value( rslide->osr, buf )) ) + rslide->tile_height = atoi( value ); + if( value ) + VIPS_DEBUG_MSG( "readslide_new: found tile-size\n" ); } rslide->bg = 0xffffff; @@ -326,13 +346,13 @@ vips__openslide_generate( VipsRegion *out, return( -1 ); } - /* We're inside a cache, so requests should always be TILE_WIDTH by - * TILE_HEIGHT pixels and on a tile boundary. + /* We're inside a cache, so requests should always be + * tile_width by tile_height pixels and on a tile boundary. */ - g_assert( (r->left % TILE_WIDTH) == 0 ); - g_assert( (r->top % TILE_HEIGHT) == 0 ); - g_assert( r->width <= TILE_WIDTH ); - g_assert( r->height <= TILE_HEIGHT ); + g_assert( (r->left % rslide->tile_width) == 0 ); + g_assert( (r->top % rslide->tile_height) == 0 ); + g_assert( r->width <= rslide->tile_width ); + g_assert( r->height <= rslide->tile_height ); openslide_read_region( seq->osr, seq->buf, @@ -427,9 +447,10 @@ vips__openslide_read( const char *filename, VipsImage *out, int level ) * 50%. */ if( vips_tilecache( raw, &t, - "tile_width", TILE_WIDTH, - "tile_height", TILE_HEIGHT, - "max_tiles", (int) (1.5 * (1 + raw->Xsize / TILE_WIDTH)), + "tile_width", rslide->tile_width, + "tile_height", rslide->tile_height, + "max_tiles", + (int) (1.5 * (1 + raw->Xsize / rslide->tile_width)), "threaded", TRUE, NULL ) ) return( -1 );