Squashed commit of the following:
sched: Rename all use of system_t to clock_t.
syscall: Rename all use of system_t to clock_t.
net: Rename all use of system_t to clock_t.
libs: Rename all use of system_t to clock_t.
fs: Rename all use of system_t to clock_t.
drivers: Rename all use of system_t to clock_t.
arch: Rename all use of system_t to clock_t.
include: Remove definition of systime_t; rename all use of system_t to clock_t.
This commit backs out most of commit b4747286b1. That change was added because sem_wait() would sometimes cause cancellation points inappropriated. But with these recent changes, nxsem_wait() is used instead and it is not a cancellation point.
In the OS, all calls to sem_wait() changed to nxsem_wait(). nxsem_wait() does not return errors via errno so each place where nxsem_wait() is now called must not examine the errno variable.
In all OS functions (not libraries), change sem_wait() to nxsem_wait(). This will prevent the OS from creating bogus cancellation points and from modifying the per-task errno variable.
sched/semaphore: Add the function nxsem_wait(). This is a new internal OS interface. It is functionally equivalent to sem_wait() except that (1) it is not a cancellation point, and (2) it does not set the per-thread errno value on return.
sched/semaphore: Add nxsem_post() which is identical to sem_post() except that it never modifies the errno variable. Changed all references to sem_post in the OS to nxsem_post().
sched/semaphore: Add nxsem_destroy() which is identical to sem_destroy() except that it never modifies the errno variable. Changed all references to sem_destroy() in the OS to nxsem_destroy().
libc/semaphore and sched/semaphore: Add nxsem_getprotocol() and nxsem_setprotocola which are identical to sem_getprotocol() and set_setprotocol() except that they never modifies the errno variable. Changed all references to sem_setprotocol in the OS to nxsem_setprotocol(). sem_getprotocol() was not used in the OS
libc/semaphore: Add nxsem_getvalue() which is identical to sem_getvalue() except that it never modifies the errno variable. Changed all references to sem_getvalue in the OS to nxsem_getvalue().
sched/semaphore: Rename all internal private functions from sem_xyz to nxsem_xyz. The sem_ prefix is (will be) reserved only for the application semaphore interfaces.
libc/semaphore: Add nxsem_init() which is identical to sem_init() except that it never modifies the errno variable. Changed all references to sem_init in the OS to nxsem_init().
sched/semaphore: Rename sem_tickwait() to nxsem_tickwait() so that it is clear this is an internal OS function.
sched/semaphoate: Rename sem_reset() to nxsem_reset() so that it is clear this is an internal OS function.
Save elapsed time before handling I2C in stm32_i2c_sem_waitstop()
This patch follows the same logic as in previous fix to
stm32_i2c_sem_waitdone().
It is possible that a context switch occurs after I2C registers are read
but before elapsed time is saved in stm32_i2c_sem_waitstop(). It is then
possible that the registers were read only once with "elapsed time"
equal 0. When scheduler resumes this thread it is quite possible that
now "elapsed time" will be well above timeout threshold. In that case
the function returns and reports a timeout, even though the registers
were not read "recently".
Fix this by inverting the order of operations in the loop - save elapsed
time before reading registers. This way a context switch anywhere in the
loop will not cause an erroneous "timeout" error.
Provide a user defined callback context for irq's, such that when
registering a callback users can provide a pointer that will get
passed back when the isr is called.
