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14479 Commits

Author SHA1 Message Date
Henrik Grimler
3daa0aa540
Bump all (ex-)science packages as part of merge with termux-packages 
So that the package that is uploaded to the main repo has a higher
version than the version in the game repo.

All packages have been uploaded manually.

%ci:no-build
 2021-12-04 14:41:46 +01:00
Henrik Grimler
b1d236ee16 openfoam: cp folder straight into TERMUX_PKG_MASSAGEDIR 
Some installed files are not recognized when we create the massage
tar, for example
$PREFIX/opt/OpenFOAM-v2106/src/OpenFOAM/memory/tmp/tmp.H.  The
compiled files work just find without them, but if we want to compile
another variant of openfoam on device then they are necessary.

Copying straight into the massage dir fixes the issue.
 2021-12-04 14:36:37 +01:00
Henrik Grimler
ba557931af openscad: fix build with latest cgal 2021-12-04 14:36:37 +01:00
Henrik Grimler
79c41ed239 libgeos: build with cmake 2021-12-04 14:36:37 +01:00
Henrik Grimler
b9c052b893 libgeos: update to 3.10.1 2021-12-04 14:36:37 +01:00
Henrik Grimler
cb8e5946b2 openfoam: update to 21.06 
Finally a working build :)

Tests done: run cavity tutorial on aarch64 and arm.

TODO/things that would be nice to test:

* Check if we actually need to set WM_{CC,CXX,CFLAGS,CXXFLAGS} in
  etc/config.sh/settings.
* Test compilation with Gcc on device
* Look at the __libc_malloc->malloc patch in sigFpe.C again, and try
  to upstream the fix so that it isn't as glibc specific.

We need to remove -std=c++11 from CXXFLAGS, or else we get errors when building with
our (rather new) version of CGAL, for example:

/data/data/com.termux/files/usr/include/CGAL/array.h:72:44: error: no template named 'index_sequence' in namespace 'std'
make_filled_array_aux(const T& value, std::index_sequence<Is...>)
                                      ~~~~~^

/data/data/com.termux/files/usr/include/CGAL/number_utils.h:320:10: warning: 'decltype(auto)' type specifier is a C++14 extension [-Wc++14-extensions]
  decltype(auto) approximate_sqrt(const NT& nt)
           ^
/data/data/com.termux/files/usr/include/CGAL/number_utils.h:320:1: error: deduced return types are a C++14 extension
  decltype(auto) approximate_sqrt(const NT& nt)
  ^
 2021-12-04 14:36:37 +01:00
Henrik Grimler
0d7e97dada mapserver: update to 7.6.4 2021-12-04 14:36:37 +01:00
Henrik Grimler
d45ecb01ed Bump packages depending on libc++ after ndk-r23 update 
All except openfoam since it does not build.
 2021-12-04 14:36:37 +01:00
Henrik Grimler
b3c90e7554 glpk: update to 5.0 2021-12-04 14:36:37 +01:00
Lucy Phipps
6bb673864a texlive: bump again 2021-12-04 14:36:37 +01:00
Lucinda May Phipps
5554c78529 texlive: bump revision 
20200406-5 is missing from repo
 2021-12-04 14:36:37 +01:00
Henrik Grimler
53a68414f1 gnucap: update to 20210107 2021-12-04 14:36:37 +01:00
Henrik Grimler
a0698575f6 proj: update to 8.1.1 2021-12-04 14:36:37 +01:00
Wetitpig
d2e73c7ebf Bump GDAL to version 3.3.2 (#76) 
* Bump GDAL to version 3.3.2
 2021-12-04 14:36:37 +01:00
Wetitpig
a1ceafe797 fix tempfileDir by @TERMUX_PREFIX@ 2021-12-04 14:36:37 +01:00
Wetitpig
3560c68a57 Bump revision 2021-12-04 14:36:37 +01:00
Wetitpig
395d616cb7 Fix single quotations 2021-12-04 14:36:37 +01:00
Yaksh Bariya
e3aed3c12e gdal: Bump to 3.3.1 2021-12-04 14:36:37 +01:00
Yaksh Bariya
c81e3e520e cgal: Bump to 5.3 2021-12-04 14:36:37 +01:00
Henrik Grimler
21c678ea6f gdal: enable postgresql and netcdf support 2021-12-04 14:36:37 +01:00
Henrik Grimler
b54419ee24 cgal: update to 5.2.2 2021-12-04 14:36:37 +01:00
Henrik Grimler
f202c4f1c8 proj: update to 8.1.0 2021-12-04 14:36:37 +01:00
Henrik Grimler
9c5893a0ac gdal: update to 3.3.0 2021-12-04 14:36:37 +01:00
Henrik Grimler
0840e634b7 libosmium: update to 2.17.0 2021-12-04 14:36:37 +01:00
Henrik Grimler
faf66c6042 osm2pgsql: update to 1.5.0 2021-12-04 14:36:37 +01:00
Henrik Grimler
f9f304898f spatialite-tools: bump after proj update 2021-12-04 14:36:37 +01:00
Henrik Grimler
cff835123c proj: update to 8.0.1 2021-12-04 14:36:37 +01:00
Henrik Grimler
3b45e93ed9 gap: update to 4.11.1 2021-12-04 14:36:37 +01:00
Henrik Grimler
0fa7f9e1de netcdf-c: update to 4.8.0 
Also disable libhdf5 dependency, seems to be recommended to remove it.
 2021-12-04 14:36:37 +01:00
Henrik Grimler
87581d6a01 openmpi: update to 4.1.1 2021-12-04 14:36:37 +01:00
Skyler Hawthorne
a570798b32 osmium-tool 2021-12-04 14:36:37 +01:00
Skyler Hawthorne
ac9c9b2d31 libosmium 2021-12-04 14:36:37 +01:00
Skyler Hawthorne
c1f5b9f39c libprotozero 2021-12-04 14:36:37 +01:00
Skyler Hawthorne
2b3e931134 libosmpbf 2021-12-04 14:36:37 +01:00
Skyler Hawthorne
f4cfdd5344 osm2pgsql: add package 2021-12-04 14:36:37 +01:00
Henrik Grimler
45bd59d9dc Set TERMUX_PKG_MAINTAINER for all packages 2021-12-04 14:36:37 +01:00
Henrik Grimler
1f9fdb30da spatialite-tools: update to 5.0.1 2021-12-04 14:36:37 +01:00
Henrik Grimler
175fd03c1f texlive: rename termux_step_post_extract_package 
This function was renamed to termux_step_post_get_source before.
%ci:no-build
 2021-12-04 14:36:37 +01:00
Henrik Grimler
9c2d75b00f texlive: add profile.d/texlive.fish script 
By @leomayer.
 2021-12-04 14:36:37 +01:00
Skyler Hawthorne
404eeeff68 gdal: add expat support 2021-12-04 14:36:37 +01:00
Henrik Grimler
b091f44e5e gdal: link against spatialite for real 2021-12-04 14:36:37 +01:00
Henrik Grimler
59729792d5 openscad: bump 
Last version was built and uploaded even though it should not have been
 2021-12-04 14:36:37 +01:00
Henrik Grimler
5007a83a51 gdal: link against libspatialite 2021-12-04 14:36:37 +01:00
Henrik Grimler
02d10c4622 spatialite-tools: add package 2021-12-04 14:36:37 +01:00
Henrik Grimler
db6492231a libspatialite: add package 2021-12-04 14:36:37 +01:00
Henrik Grimler
0154a605a3 openscad: rm accidently checked in patch 
ci:no-build
 2021-12-04 14:36:37 +01:00
Henrik Grimler
cc4ce9acf2 librttopo: add package 2021-12-04 14:36:37 +01:00
Henrik Grimler
8ec413bc9c libfreexl: add package 2021-12-04 14:36:36 +01:00
Henrik Grimler
43f44b327a libgeos: update to 3.9.1 2021-12-04 14:36:36 +01:00
Henrik Grimler
a5c96bd040 openbabel: bump after boost update 2021-12-04 14:36:36 +01:00
Henrik Grimler
3e5010bd33 openmpi: autoreconf to fix linking with libomp.a 
Fixes https://github.com/termux/science-packages/issues/65.
 2021-12-04 14:36:36 +01:00
Henrik Grimler
c1d257f778 cgal: update to 5.2 2021-12-04 14:36:36 +01:00
Henrik Grimler
318fab83e0 eigen: update to 3.3.9 2021-12-04 14:36:36 +01:00
Henrik Grimler
a49f3c00cc gdal: update to 3.2.1 2021-12-04 14:36:36 +01:00
Henrik Grimler
cf378d5fe4 mapserver: update to 7.6.2 2021-12-04 14:36:36 +01:00
Henrik Grimler
65dec0e9b9 proj: update to 7.2.1 2021-12-04 14:36:36 +01:00
Henrik Grimler
36ad626e2a openmpi: update to 4.1.0 2021-12-04 14:36:36 +01:00
Henrik Grimler
b810bcdbfa cgal: update to 5.1.1 2021-12-04 14:36:36 +01:00
Henrik Grimler
80189aaca6 gdal: update to 3.2.0 2021-12-04 14:36:36 +01:00
Henrik Grimler
28d1240b38 proj: update to 7.2.0 2021-12-04 14:36:36 +01:00
Henrik Grimler
a0686edfa5 eigen: update to 3.3.8 2021-12-04 14:36:36 +01:00
Henrik Grimler
40502acc91 cgal: update to 5.1 2021-12-04 14:36:36 +01:00
Henrik Grimler
23d37f05a0 glpk: add package 
Requested in https://github.com/termux/science-packages/issues/53
 2021-12-04 14:36:36 +01:00
Henrik Grimler
df2a6d6245 openmpi: update to 4.0.5 2021-12-04 14:36:36 +01:00
Henrik Grimler
6e3773471e proj: update to 7.1.1 2021-12-04 14:36:36 +01:00
Henrik Grimler
4354d80753 gdal: update to 3.1.3 2021-12-04 14:36:36 +01:00
Konstantin Podsvirov
7da4e900db openscad: bump to rebuild against latest boost 2021-12-04 14:36:36 +01:00
Henrik Grimler
12016d5e0b mapserver: update to 7.6.1 2021-12-04 14:36:36 +01:00
Henrik Grimler
1879322d2a cgal: update to 5.0.3 2021-12-04 14:36:36 +01:00
Leonid Pliushch
c54915dafd openmpi: disable -Wl,--as-needed to force-link with libandroid-shmem 2021-12-04 14:36:36 +01:00
Henrik Grimler
7975ac248f openscad: fix build error 
boost/detail/endian.hpp does not seem to be used in import.cc so no need to include it
 2021-12-04 14:36:36 +01:00
Henrik Grimler
93a09271c4 openscad: bump to rebuild against latest boost 2021-12-04 14:36:36 +01:00
Henrik Grimler
5edf7ff46a mapserver: extract LICENSE from README 2021-12-04 14:36:36 +01:00
Henrik Grimler
2bc4cc9d6f gdal: update to 3.1.2 2021-12-04 14:36:36 +01:00
Henrik Grimler
6ca242c2a9 proj: bump to include license file in package 2021-12-04 14:36:36 +01:00
Henrik Grimler
3fbbc6c5f1 openmpi: bump to include license file in package 2021-12-04 14:36:36 +01:00
Henrik Grimler
180561ad02 netcdf-c: bump to include license file in package 2021-12-04 14:36:36 +01:00
Henrik Grimler
bb63b93dfe mapserver: bump to include license file in package 2021-12-04 14:36:36 +01:00
Henrik Grimler
bdf7964e00 libhdf5: bump to include license file in package 2021-12-04 14:36:36 +01:00
Henrik Grimler
91b0a021fa bump openmpi and proj to restart build 2021-12-04 14:36:36 +01:00
Henrik Grimler
2a4a0b5b06 openmpi: fix memory_patcher_component 2021-12-04 14:36:36 +01:00
Henrik Grimler
42b35372c5 proj: update to 7.1.0 2021-12-04 14:36:36 +01:00
Henrik Grimler
a9911bf8db openmpi: update to 4.0.4 2021-12-04 14:36:36 +01:00
Henrik Grimler
451483f15c openbabel: update to 3.1.1 2021-12-04 14:36:36 +01:00
Henrik Grimler
0b9c09ebad mapserver: bump after gdal update 2021-12-04 14:36:36 +01:00
Henrik Grimler
b4a6aedfc8 gdal: update to 3.1.0 2021-12-04 14:36:36 +01:00
Henrik Grimler
b44bf3d489 mapserver: update to 7.6.0 2021-12-04 14:36:36 +01:00
Henrik Grimler
8efa9ef5e0 texlive: make new subpackages conflict with fontsextra 
Fix typos when retrieving file lists for texlive-libertinus-type1 and
texlive-ipaex-type1 and make sure mktexlsr can be found in postinst scripts

%ci:no-build
 2021-12-04 14:36:36 +01:00
Henrik Grimler
61cef608cc proj: restart build 
%ci:reset-backlog
 2021-12-04 14:36:36 +01:00
Henrik Grimler
a70f9524c3 proj: update to 7.0.1 2021-12-04 14:36:36 +01:00
Henrik Grimler
3f1f516e58 texlive: create 20 new subpackages from texlive-fontsextra to decrease size 2021-12-04 14:36:36 +01:00
Henrik Grimler
89952bd6b6 texlive: fix more scripts 
Midly annoying that the texlive root is not retrieved from TEXMFROOT..
 2021-12-04 14:36:36 +01:00
Henrik Grimler
01abe10e2a texlive: depend on texlive-bin >= 20200406-4 
Required since binaries where moved to $PREFIX/bin/texlive.
 2021-12-04 14:36:36 +01:00
Henrik Grimler
4ead576743 texlive: mv from main repository 
Also add profile.d script to add bin/texlive/ to path as binaries in texlive-bin have been moved there
 2021-12-04 14:36:36 +01:00
Henrik Grimler
51ed4a9f0f mapserver: update to 7.4.4 2021-12-04 14:36:36 +01:00
Henrik Grimler
28e236d904 gap: exclude pkgs again to keep deb size small 2021-12-04 14:36:36 +01:00
Henrik Grimler
2190e8945a netcdf-c: update to 4.7.4 2021-12-04 14:36:36 +01:00
Henrik Grimler
baebc6198d libhdf5: build with zlib support 2021-12-04 14:36:36 +01:00
Henrik Grimler
2e355869d4 gap: update to 4.11.0 
Also include all packages in deb, and fix some path errors.
 2021-12-04 14:36:36 +01:00
Henrik Grimler
23ee1bc6ed openmpi: update to 4.0.3 2021-12-04 14:36:36 +01:00
Henrik Grimler
2ced20c8f9 Bump gdal and mapserver after proj update 2021-12-04 14:36:36 +01:00
Henrik Grimler
5551b3ba14 proj: update to 7.0.0 2021-12-04 14:36:36 +01:00
Henrik Grimler
af3a7562a5 netcdf-c: bump after libhdf5 update 2021-12-04 14:36:36 +01:00
Henrik Grimler
29f627e799 libhdf5: update to 1.12.0 2021-12-04 14:36:36 +01:00
Henrik Grimler
46227fad86 cgal: update to 5.0.2 2021-12-04 14:36:36 +01:00
Henrik Grimler
98a3050b01 proj: update to 6.3.1 2021-12-04 14:36:36 +01:00
Henrik Grimler
af69bf1923 openscad: skip (outdated?) boost check 
Upstream issue: https://github.com/openscad/openscad/issues/3197
 2021-12-04 14:36:36 +01:00
Henrik Grimler
4a20a80801 openscad: bump after cgal update 2021-12-04 14:36:36 +01:00
Henrik Grimler
c64a27f7f3 gdal: update to 3.0.4 2021-12-04 14:36:36 +01:00
Henrik Grimler
4db3f1f391 cgal: update to 5.0.1 2021-12-04 14:36:36 +01:00
Henrik Grimler
e4bffe13f9 openmpi: remove no longer needed -llog flag 2021-12-04 14:36:36 +01:00
Henrik Grimler
3e05d2d9bc proj: update to 6.3.0 2021-12-04 14:36:36 +01:00
Henrik Grimler
4ad00be3d4 mapserver: update to 7.4.3 2021-12-04 14:36:36 +01:00
Henrik Grimler
b2e96a5629 libhdf5: update to 1.10.6 2021-12-04 14:36:36 +01:00
Henrik Grimler
25104fc415 gdal: update to 3.0.2 2021-12-04 14:36:36 +01:00
Henrik Grimler
f4071c3354 proj: update to 6.2.1 2021-12-04 14:36:36 +01:00
Henrik Grimler
9793efeeca netcdf-c: update to 4.7.3 2021-12-04 14:36:36 +01:00
Henrik Grimler
d291de5e51 mapserver: update to 7.4.2 2021-12-04 14:36:36 +01:00
Henrik Grimler
24293e2087 libgeos: update to 3.8.0 2021-12-04 14:36:36 +01:00
Henrik Grimler
101dfb1276 eigen: switch to gitlab for src tar 2021-12-04 14:36:36 +01:00
Henrik Grimler
fffc39cd59 openscad: install openscad, examples and libraries 2021-12-04 14:36:36 +01:00
Henrik Grimler
a25d559f89 openscad: link with boost "manually" 
features/boost.prf might be the proper file to patch rather than doing this
 2021-12-04 14:36:36 +01:00
Leonid Plyushch
0753b8b696 new package: openscad 2021-12-04 14:36:36 +01:00
Henrik Grimler
12f131bb64 openmpi: fix shmem patch 2021-12-04 14:36:36 +01:00
Henrik Grimler
aaceda4c49 openmpi: update to 4.0.2 2021-12-04 14:36:36 +01:00
Henrik Grimler
edfe129cb8 openbabel: bump to trigger ci 2021-12-04 14:36:36 +01:00
Henrik Grimler
eccfa15b01 openfoam: use 'true' instead of 'yes' in build.sh 2021-12-04 14:36:36 +01:00
Henrik Grimler
8927f78444 openbabel: update to 3.0.0 2021-12-04 14:36:36 +01:00
Leonid Plyushch
3be2fb1f79 new package: cgal 2021-12-04 14:36:36 +01:00
Henrik Grimler
74e0310f2e Bump updated packages and reset backlog 
%ci:reset-backlog

Otherwise CI tries to build openfoam
 2021-12-04 14:36:36 +01:00
Henrik Grimler
f7c39ce3c9 proj: update to 6.2.0 2021-12-04 14:36:36 +01:00
Henrik Grimler
ff18eca8b4 netcdf-c: update to 4.7.1 2021-12-04 14:36:36 +01:00
Henrik Grimler
a258c940fe gap: update to 4.10.2 2021-12-04 14:36:36 +01:00
Henrik Grimler
e02d9e00a6 OpenFOAM: add package 
Build takes waaay to long for CI so:
%ci:no-build
 2021-12-04 14:36:36 +01:00
Henrik Grimler
dd3bdc44c7 mapserver: Update to 7.4.1 2021-12-04 14:36:36 +01:00
Leonid Plyushch
2b9c1ae358 fix build.sh for some packages 
Build system require to use true/false for boolean variables.
 2021-12-04 14:36:36 +01:00
Henrik Grimler
3f80bea1a5 gap: add dependency zlib 2021-12-04 14:36:36 +01:00
Henrik Grimler
d5bd386c24 proj: update to 6.1.1 
%ci:reset-backlog
 2021-12-04 14:36:36 +01:00
Henrik Grimler
18a295aeca netcdf-c: bump and conflict with dev pkg 
%ci-no-build
 2021-12-04 14:36:36 +01:00
Henrik Grimler
16326b70a5 mapserver: bump and conflict with dev pkg 
%ci-no-build
 2021-12-04 14:36:36 +01:00
Henrik Grimler
975f7f7245 openbabel: bump and conflict with dev pkg 
%ci-no-build
 2021-12-04 14:36:36 +01:00
Henrik Grimler
c853eb39d5 openmpi: bump and conflict with dev pkg 
%ci-no-build
 2021-12-04 14:36:36 +01:00
Henrik Grimler
5734d073c1 libhdf5: bump and conflict with dev pkg 
%ci-no-build
 2021-12-04 14:36:36 +01:00
Henrik Grimler
4fdc07c949 libgeos: build static library 
%ci:no-build
 2021-12-04 14:36:36 +01:00
Henrik Grimler
8fe8952089 libgeos: bump and conflict with dev pkg 
%ci:no-build
 2021-12-04 14:36:36 +01:00
Henrik Grimler
2abedda0f5 gnucap: bump and conflict with dev pkg 
%ci:no-build
 2021-12-04 14:36:36 +01:00
Henrik Grimler
8de6a73f88 proj: bump and conflict with dev pkg 
%ci:no-build
 2021-12-04 14:36:36 +01:00
Henrik Grimler
7137697649 gap: bump and conflict with dev pkg 
%ci:no-build
 2021-12-04 14:36:36 +01:00
Henrik Grimler
ca2f1a0c61 eigen: bump and conflict with dev pkg 
%ci:no-build
 2021-12-04 14:36:36 +01:00
Henrik Grimler
38bf8e0655 gdal: conflict with dev pkg 
%ci-no-build
 2021-12-04 14:36:36 +01:00